microbiome

Microbiome Core

/in

Services

16S V3-V4 Amplicon Sequencing

3’ Single cell RNA sequencing-10XGenomics MRL

5’ Single cell RNA sequencing-10XGenomics MRL

Bacterial RNA Sequencing

DNA/RNA Extraction MRL

Fixed RNA Single cell RNA sequencing-10XGenomics MRL

Full-length 16S rRNA Gene Sequencing

ITS (Internal transcribed spacer) Sequencing for Fungi Detection

Metatranscriptomics Illumina MRL

Native RNA Sequencing on Nanopore

Pathogen-Genome Sequencing Nanopore MRL

Pathogen-Genome Sequencing on Illumina

Sample Quality Control-MRL

Shotgun-Metagenomics Illumina MRL

Single cell Multiomics-10XGenomics MRL

Single cell surface protein profiling-10XGenomics MRL

Team

Bo Zhang
Microbiome Core and Raj Lab Lab Manager
Expertise: Single cell sequencing, Bulk RNAseq, MicrobiomeSeq
Bo.Zhang@UTSouthwestern.edu
214-645-5153
Carlos Arana
Microbiome Core Computational Biologist
Expertise: Computational biology, Genome sequencing, Bioinfomatics
Carlos.Arana@UTSouthwestern.edu
214-645-5996
Tulasi Relangi
Microbiome Core and Raj Lab Postdoctoral Researcher
Expertise: Long-read sequencing data, bioinformatics
TulasiRao.Relangi@UTSouthwestern.edu
214-645-5153
Srisha Sridharan
Microbiome Core Senior Research Associate
Expertise: DNA/RNA extraction, 16/ITS sequencing
Srisha.Sridharan@UTSouthwestern.edu
214-645-5153

Related Publications

  • A short plus long-amplicon based sequencing approach improves genomic coverage and variant detection in the SARS-CoV-2 genome [PDF] [DOI] [PubMed]
  • Small proline-rich protein 2A is a gut bactericidal protein deployed during helminth infection [PDF] [DOI] [PubMed]
  • Impact of Bead-Beating Intensity on the Genus- and Species-Level Characterization of the Gut Microbiome Using Amplicon and Complete 16S rRNA Gene Sequencing [PDF] [DOI] [PubMed]
  • Serum amyloid A delivers retinol to intestinal myeloid cells to promote adaptive immunity [PDF] [DOI] [PubMed]
  • The microbiota coordinates diurnal rhythms in innate immunity with the circadian clock [PDF] [DOI] [PubMed]
  • Endocannabinoids Inhibit the Induction of Virulence in Enteric Pathogens [PDF] [DOI] [PubMed]
  • Resistin-like Molecule α Provides Vitamin-A-Dependent Antimicrobial Protection in the Skin [PDF] [DOI] [PubMed]
  • The impact of Staphylococcus aureus genomic variation on clinical phenotype of children with acute hematogenous osteomyelitis [PDF] [DOI] [PubMed]